* Elucidating function by identifying similarity to other known structures
* Finding novel signaling mechanisms (see work on PHinder)
* Modeling co-receptor/ligand dynamics
* Identifying function of orphan receptors
* Working with ancestral genes by identifying descendant structure
* Classifying and clustering proteins based on solved structure
* Learning new biochemical mechanisms through active vs inactive state structures
...
* Elucidating function by identifying similarity to other known structures
* Finding novel signaling mechanisms (see work on PHinder)
* Modeling co-receptor/ligand dynamics
* Identifying function of orphan receptors
* Working with ancestral genes by identifying descendant structure
* Classifying and clustering proteins based on solved structure
* Learning new biochemical mechanisms through active vs inactive state structures
...